Somali Refugee Health Profile

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Priority Health Conditions
A list of priority health conditions to consider when caring for or assisting Somali refugees.

Geography, Ethnic group, Clan Structure, Language, Education and Literacy, Religious Beliefs, Family and Kinship, Tips for Clinicians

Population Movements
Somalia to Kenya, Ethiopia, and Yemen, Resettlement to the United States

Healthcare Access and Health Concerns
Immunizations, Women’s Health Issues, Female Genital Mutilation/Cutting, Sexual-and Gender- Based Violence

Medical Screening of US-Bound Refugees
Overseas Medical Examination, Pre-Departure Medical Screening, Pre-Embarkation Checks, Vaccination Program for US-Bound Refugees, Presumptive Therapies for Parasitic Infections

Health Conditions to Consider during Post-arrival Medical Screening
Communicable Disease, Parasitic Infections, Non-Communicable Disease, Mental Health, Vaccine Hesitancy, Continuity of Care

Priority Health Conditions

Somali refugees have been resettled for many years in communities across the United States. The information in this refugee health profile is intended to help resettlement agencies, clinicians, and public health providers understand the health issues of greatest interest or concern pertaining to Somali refugee populations in the United States, as well as their cultural background and circumstances of their displacement.

The health conditions listed below are considered priority health conditions in caring for and assisting Somali refugees. This combination of health conditions represents a distinct health burden for the Somali refugee population.


After gaining independence from Italy and Great Britain in 1960, Somalia was a stable nation. However, political instability in the early 1990s resulted in a protracted humanitarian crisis and an ongoing, territorial civil war. Recent elections have been largely peaceful and shown signs of progress, but Somalia remains deeply divided by insurgent groups and rival militias. The civil war, coupled with extreme famine (particularly in rural areas), unequal distribution of aid, and poor economic prospects, has led to the mass exodus and diaspora of Somalis worldwide 1.


The Federal Republic of Somalia (hereafter referred to as Somalia), is located in Eastern Africa and is part of the Horn of Africa, a large peninsula that juts into the Arabian Sea (Figure 1). Somalia borders Kenya, Ethiopia, and Djibouti, as well as the Gulf of Aden and the Indian Ocean. Although Somalia has a largely desert climate, parts of the country experience seasonal monsoons. The country is prone to recurring droughts, frequent dust storms in the eastern plains, and flooding during the rainy season. Famine, deforestation, overgrazing, soil erosion, and desertification have become major issues in recent decades 2.

Figure 1: Map of the Horn of Africa Regional map showing Somalia’s location on the Horn of Africa.

Figure 1: Map of the Horn of Africa  Regional map showing Somalia’s location on the Horn of Africa. Somalia is a coastal nation, bordering Djibouti, Ethiopia, and Kenya.

Somalia is a coastal nation, bordering Djibouti, Ethiopia, and Kenya.

Ethnic Groups

Ethnic Somalis are unified by culture, language, religion (Islam), and common Samaale ancestry. Persons of Somali origin account for approximately 85% of the population, while minority ethnic groups account for the remaining 15% 2. The largest ethnic minority in Somalia is the Somali Bantu, whose ancestral origins include, among others, the Makua, Yao, Ngindo, and Nyasa of Tanzania, Mozambique, and Malawi 3. Many Bantu trace their origins to ancestors from these southeast African tribes who were enslaved and brought to Somalia during the 18th century 3. Minority ethnic groups also include Bravanese (Barawa) and Rerhamar (Arab descent); Bajuni (originating from the East African coast); as well as the Galgala, Tumal, Yibir, Gaboye, and Eyle 4.

Clan Structure

Ethnic groups in Somalia can be further divided into clans. Clans are socially and politically important, and membership is determined by paternal lineage 5, 6 Majority (Somali origin) members (or “nobles”) belong to one of four patrilineal clans: Darod, Hawiye, Dir, and Rahanweyn (Digil-Mirifle). These clans largely dominate modern government and politics, as well as the economy and urban life 5. Somalia’s minority clans are incredibly diverse, and are defined not solely by ethnicity, religion, or linguistic variances, but also by social and historical distinctions 5. Minority clans are derived from minority ethnic groups. Minority clans include Bantu, Bravanese (Barawan), Bajuni, Eyle, Galgala, Tumal, Yibir, and Gaboye 4. Minority clans often live in poverty, and many suffer from discrimination and exclusion. Insufficient numbers of health centers in regions where minorities live and lack of public transit infrastructure often prevent minorities from accessing critical health care services 4.

Clans are a very sensitive topic for many Somalis. Enduring tension between rival clans has been a major factor in the ongoing conflict in Somalia. Clinicians should avoid discussing clans with Somali patients as many may find it disrespectful or offensive 6.


Somali is the primary official language. There are two main Somali dialects: Standard Somali and Digil/Raxanweyn Somali. Standard Somali is spoken by most Somalis, while the Digil/Raxanweyn dialect is spoken primarily in Shabelle and Juba river valleys in the south 7. However, Standard Arabic is also an official language (according to the Transitional Federal Charter) 2. Italian and English are common, and Swahili is also spoken in regions in southern Somalia 2, 7. Indigenous languages include Maay, Oromo, Borana-Arsi-Guji, Dabarre, Garre, Jiiddu, Mushungulu, Tunni, and Boon 8.

Education and Literacy

Civil war resulted in a complete breakdown of the formal education system in Somalia. Somalia has one of the world’s lowest enrollment rates for primary school-aged children, where as few as 25% of children have access to primary education, and secondary school enrollment is estimated at 6% 9. Of note, school enrollment in Somalia is substantially higher for boys than girls 7. Educational opportunities for Somalis are also limited in countries of asylum. In the Dadaab Refugee Complex in Kenya, access to quality education is severely limited. The number of school-aged children in Dadaab far exceeds the capacity of schools, and schools lack adequately trained teachers and learning resources 10.

Literacy among Somalis is low. Among adults (15 years of age or older), male literacy is approximately 49.7%, while literacy among women is substantially lower at 25.8% 9.

Religious Beliefs

The provisional federal constitution of Somalia recognizes Islam as the state religion and requires that all laws must comply with the general principles of sharia 11. Nearly all Somalis are Sunni Muslim, and it is estimated that less than 1% of the total population belongs to other religious groups (e.g. Christian, Shia Muslim) 2, 11.

Family and Kinship

Somali society tends to be patriarchal, and men and women are generally separated in most spheres of life. Men often act as the head of the household and work outside the home, while women usually manage the home and raise children. Family is extremely important; Somali culture is more focused on the family than on the individual. It is not uncommon for extended families to live together 6. Elders are venerated within the Somali community, and their counsel is sought for personal and community issues 6. In some communities, arranged marriages may be common. Some Somalis may practice polygamy; men may have multiple wives, if they can afford to do so 6.

Tips for Clinicians

The majority of Somalis, particularly those who have lived in urban areas, have had some experience with Western medicine. Providers should ask new arrivals about past experiences with Western medicine, as well as their opinions of Western medical practices 12. However, some Somali refugees may be unfamiliar with routine preventative care, such as prenatal or well-child care 6. Additionally, many Somalis have had experience with traditional healers. Traditional healers use a variety of methods including fire-burning (a procedure where a stick from a special tree is heated and applied to the skin to cure illness), herbal remedies, and prayer. They employ these methods to treat a variety of illnesses such as viral hepatitis, measles, mumps, and varicella (chickenpox), and may be familiar with treating hunchback, facial droop, and broken bones. Traditional doctors are believed to have the ability to cure illnesses caused by spirits 6.

Like most populations, Somalis tend to have specific care preferences, attitudes, and expectations driven by cultural norms and religious beliefs 6. However, individual interpretations of Islam and diverse cultural practices require healthcare providers to address views and preferences of each refugee 13.

While there are no universal Islamic healthcare practices or preferences, Somali Muslims (who account for roughly 99% of the Somali population) may be more likely than the general US patient population to:

  • View the health of each individual as a family concern 13
  • Accompany family members, especially wives and children, to medical appointments 13
  • Prefer a healthcare provider and/or interpreter of the same sex 13
  • Feel uncomfortable disclosing health information to strangers, potentially making initial diagnosis difficult 13
  • Express concern regarding vaccine safety, particularly with childhood measles, mumps, and rubella (MMR) vaccination 14
  • Be unfamiliar with chronic diseases and the need to take medication for a long time 12
  • Use herbs and other traditional medicines provided by traditional healers 12
  • Consult traditional and spiritual healers about mental health issues 12
  • Have dietary restrictions and avoid consuming pork products, medications with pork ingredients (common in gel formulations), and meat that is not Halal* 13
  • Abstain from alcohol 6
  • Request vegetarian meals in hospitals, or have family bring meals during hospital stays 13
  • Fast (avoid food, water, and medicine from dawn to dusk) during the month of Ramadan and may opt to take medications before dawn or after dusk to avoid breaking fast 13

*Halal is Arabic for “lawful” or “permitted” and refers to how meat is butchered in accordance with Islamic law.

When possible, providers should ask patients if they prefer an interpreter who is of the same ethnic background or gender.

Additional Resources

For more information about the orientation, resettlement, and adjustment of Somali and Somali Bantu refugees, please visit EthnoMedexternal icon.

Population Movements

Somalia is considered a globalized nation, with more than 1 million Somalis currently living outside the country. Somalis are largely concentrated in three areas: the Horn of Africa and Yemen, Gulf States, and Western Europe and North America 15. Nearly two-thirds of all Somalis living outside Somalia live in neighboring countries, namely Kenya, Ethiopia, Djibouti, and Yemen 16. In Europe, the United Kingdom is home to the largest Somali community, followed by the Netherlands, Norway, Sweden, and Denmark 15. A growing number of Somalis have also settled in Switzerland, many of whom arrived as asylum seekers 16. Lastly, Malaysia and Australia have also seen an influx of Somali immigrants in recent years 15. In the United States, Minnesota is home to the largest Somali community, with the majority residing in the Minneapolis-St. Paul metropolitan area (Hennepin and Ramsey counties), as well as St. Cloud and Rochester 17. Many Somali refugees and immigrants have also settled in the Seattle metropolitan area, as well as Columbus (Ohio) and the surrounding area 14, 18.

As of December 2016, the United Nations High Commissioner for Refugees (UNHCR) estimated that more than 1.5 million Somalis were internally displaced. Additionally, as of January 2018, more than 875,000 Somalis were registered with UNHCR as refugees in Africa and the Middle East 19, 20. However, this figure only accounts for registered refugees, and therefore likely underestimates the scale of the refugee crisis in the Horn of Africa. Kenya, Ethiopia, and Yemen host the largest numbers of Somali refugees. Somali refugees have also fled, in smaller numbers, to Djibouti, Egypt, Eritrea, Uganda, and South Africa 20.

To Kenya

Kenya hosts the largest number of Somali refugees (more than 313,000 as of April 2017), most of concentrated in the Dadaab Refugee Complex, in Garissa County near the Somali border. Established in 1991 to provide refuge for families fleeing the Somali Civil War, Dadaab consists of four camps: Dagahaley, Hagadera, Ifo, and Ifo 2. A fifth camp, Kambioos, was closed in February 2017. As of April 30, 2017, UNHCR estimated that approximately 245,000 Somali refugees live in Dadaab 20. Other sources estimate that between 300,000 and 350,000 Somali refugees reside in Dadaab, as many refugees in the complex are not registered with UNHCR 21, 22. Some camp residents have lived in Dadaab for more than 20 years, while many others were born in the camp and have never set foot in Somalia. Additionally, as of April 2017, approximately 40,000 Somali refugees were living in Kakuma Refugee Camp, located in northwest Turkana County, and more than 30,000 Somali refugees were living in Nairobi 20.

To Ethiopia

As of March 2018, more than 255,000 registered Somali refugees were living in Ethiopia. At that time, more than 217,000 Somali refugees lived in Dollo Ado Refugee Complex, which consists of five camps: Bokolmanyo, Melkadida, Kobe, Buramino, and Hilaweyn. At the end of March 2018, roughly 37,000 Somali refugees resided in the Jijiga Refugee Complex, consisting of three camps: Aw-barre, Kebribeyah, and Sheder. Additionally, UNHCR reports that fewer than 1,000 Somali refugees live in Addis Ababa. However, the true number of refugees in Addis Ababa is likely much higher, as UNHCR estimates only account for registered refugees 20.

To Yemen

While the majority of Somali refugees have sought asylum in either Ethiopia or Kenya (exceeding 567,000 total refugees), more than 255,000 Somali refugees have been registered in Yemen as of December 2017 20. Somali refugees have been arriving steadily by boat in Yemen since 1991, via the Gulf of Aden 23. Some Somali refugees go to Kharaz Refugee Camp. However, Kharaz is too small and underresourced to accommodate the number of new arrivals; therefore many remain in urban areas such as Sana’a 23, 24. In Yemen, Somali refugees often live in poverty, have difficulty finding work, and are at increased risk of human trafficking and discrimination. Some Somalis try to reach Saudi Arabia for better employment opportunities.

For up-to-date information regarding Somali refugees in the Horn of Africa and Yemen, please visit UNHCR’s Information Sharing Portal for Refugees in the Horn of Africa: Somali Displacement Crisisexternal icon.

Resettlement to the United States

Resettlement of refugees from Somalia first began in 1990. The number of Somali refugee arrivals nearly tripled between 2011 and 2014. Since 2014, Somali refugee arrivals have remained consistent at roughly 9,000 each year (Figure 2) 25. From 2010 to 2016 (fiscal years, October 1 to September 30), more than 47,000 Somali refugees arrived in the United States, with the majority of arrivals under 45 years of age and roughly equal numbers of male and female (Figure 3) 25. During this time, Minnesota and New York welcomed the largest numbers of Somali primary refugee arrivals, followed by Texas, Arizona, Ohio, and Washington (Figure 4) 26.

Following initial resettlement in the United States, many Somali refugees relocate to states with well-established Somali communities. Minnesota receives a significant number of secondary refugee arrivals, with the largest numbers coming from New York and Texas. From 2010 to 2016, the Minnesota Department of Health (Refugee Health Program) was notified of 3,740 secondary arrivals 17. However, the true number of secondary Somali arrivals is likely much higher, as the state is not always notified. The majority of secondary arrivals in Minnesota settle in Hennepin, Stearns, and Kandiyohi counties, all of which have well-established Somali communities 17.

Figure 2: Somali Refugee Arrivals in the United States, Fiscal Years (FY)* 2010–2016 (N=47,407)

Figure 2: Somali Refugee Arrivals in the United States, Fiscal Years (FY)* 2010–2016 (N=47,407)  Chart depicting the number of Somali refugee arrivals from FY 2010-2016. There was a slight decrease in arrivals from 2010 (N=4,873) to 2011 (N=3,145). From 2011-2014, the number of Somali refugee arrivals increased from 3,145 (in 2011) to 9,011 (in 2014). From 2014-2016, the number of Somali refugee arrivals remained relatively constant at approximately 9,000 arrivals each year.

Source: Worldwide Refugee Admissions Processing System (WRAPS) [25]
*US fiscal year begins October 1 and continues through September 30 the following calendar year

Figure 3: Age Distribution for Somali Refugees at Time of Resettlement to the United States, FY 2010–2016 (N=47,407)

Figure 3: Age Distribution for Somali Refugees at Time of Resettlement to the United States, FY 2010–2016 (N=47,407)

Source: Worldwide Refugee Admissions Processing System (WRAPS) [25]

Figure 4: States of Primary Resettlement for Somali Refugees, FY 2010-2016

Figure 4: States of Primary Resettlement for Somali Refugees, FY 2010-2016 From 2010-2016, more than 47,000 Somali refugees have been resettled in the United States. Minnesota, New York, Texas, Arizona, Ohio, and Washington all received more than 2,000 refugees. During this time period, Somali refugees were resettled in every state except for Hawaii, Montana, Arkansas, West Virginia, and Delaware.

The remaining 17,139 refugees were resettled in 34 different states across the United States, as well as the District of Columbia
States of Primary Resettlement for Somali Refugees
States N %
Minnesota 5,659 11.9
New York 3,786 8.0
Texas 3,620 7.6
Arizona 3,250 6.9
Ohio 2,834 6.0
Washington 2,422 5.1
Missouri 1,885 4.0
Massachusetts 1,781 3.8
Georgia 1,725 3.6
Kentucky 1,693 3.6
California 1,613 3.4

The remaining 17,139 refugees were resettled in 34 different states across the United States, as well as the District of Columbia 26.
Source: Worldwide Refugee Admissions Processing System (WRAPS) 26.

Healthcare Access and Health Concerns

Nonprofit organizations often provide health services to Somali refugees living in refugee camps and urban areas. Programs include water, sanitation, and hygiene (WASH) initiatives, primary and secondary health services, maternal and newborn services, tuberculosis (TB) treatment, and initiatives to address and reduce sexual and gender-based violence 27. In some settings, such as Dadaab Refugee Complex, various outpatient services include consultation clinics, specialized and tertiary care, emergency medicine, as well as laboratory and pharmacy services 27. Limited mental health services are available 27. Refugees living outside refugee camps, particularly those not registered by UNHCR, may not have access to services in countries of asylum because they lack legal status, inability to obtain a residency permit, or inability to pay.


Some Somalis may have been vaccinated prior to displacement through national immunization campaigns. In Kenya, nongovernmental organizations (NGOs), often supported by the Ministry of Health, may provide immunizations. Additionally, US-bound Somali refugees may receive select vaccines as part of the voluntary Vaccination Program for US-bound Refugees depending on the country of processing (see Vaccination Program for US-bound Refugees for additional information). However, Somali refugees generally have not completed the full Advisory Committee on Immunization Practices (ACIP)-recommended vaccination schedule before departing for the United States.

Women’s Health Issues

In Somalia, maternal and infant mortality rates are among the highest in the world. The maternal mortality ratio for Somali women is 732 deaths per 100,000 live births, while the infant mortality rate is estimated at 96.6 neonatal deaths per 1,000 live births 2, 28. The fertility rate among Somali women is also high, with the average woman giving birth to 6.4 children during her life 29. The prevalence of contraception use is unknown.

Reproductive health data are extremely limited among Somali refugees. Generally, fertility rates among Somali refugees are high, and high rates of maternal mortality are exacerbated by a lack of awareness of the dangers of frequent childbirth and pregnancy at an early age. Even when reproductive health, family planning, and gender-based violence education and clinical services are available, utilization is often low 30.

Healthcare providers in Dadaab and Kakuma report that many camp residents lack a basic understanding of reproductive health practices, family planning methods, preventative health services, and antenatal care 31. Although UNHCR-registered refugees in Yemen are allowed to use healthcare services, refugees often have difficulty accessing necessary care, the quality of care is largely insufficient, and public services are overburdened 30.

Female Genital Mutilation/Cutting

Female genital mutilation/cutting (FGM/C) is defined as the partial or total removal of female genitalia or other intentional injury to female genital organs 32. Despite many countries having passed or drafted legislation banning FGM/C, global advocacy to end the practice, and lack of validation in Islam, FGM/C remains ingrained in Somali culture 32, 33.

In Somalia, FGM/C prevalence is estimated to be as high as 98%  34. Infibulation (Type III), the most severe form of the procedure, is most common in northeastern Africa, including Somalia 35. FGM/C is also well documented in neighboring countries where Somali refugees have sought asylum. The prevalence of FGM/C among girls and women aged 15–49 years is estimated at 19% in Yemen, 21% in Kenya, 74% in Ethiopia, 83% in Eritrea, and 93% in Djibouti 34. Ethnicity is the most significant predictor for FGM/C. Ethnic groups often adhere to traditional cultural norms, including FGM/C, regardless of where they live. For example, among ethnic Somalis residing in Kenya, 98% of women and girls are believed to have undergone the procedure. This prevalence mirrors estimates in Somalia, yet far exceeds the reported national prevalence in Kenya 36.

There is a large body of scientific literature on FGM/C, as well as best practices in gynecological care for FGM/C survivors. These publications may be helpful to clinicians and others working with Somali women:

  • Johnson-Agbakwu CE, Flynn P, Asiedu GB, Hedberg E, Breitkopf CR. Adaptation of an acculturation scale for African refugee women. J Immigr Minor Health 2016 Feb;18(1):252–62.
  • Johnson-Agbakwu CE, Allen J, Nizigiyimana JF, Ramirez G, Hollifield M. Mental health screening among newly arrived refugees seeking routine obstetric and gynecologic care. Psychol Serv 2014 Nov;11(4):470–6.
  • Johnson-Agbakwu CE, Helm T, Killawi A, Padela AI. Perceptions of obstetrical interventions and female genital cutting: insights of men in a Somali refugee community. Ethn Health 2014 Aug;19(4):440–57.
  • Lazar JN, Johnson-Agbakwu CE, Davis OI, Shipp MP. Providers’ perceptions of challenges in obstetrical care for Somali women. Obstet Gynecol Int 2013;2013:149640.
  • Public Policy Advisory Network on Female Genital Surgeries in Africa. Seven things to know about female genital surgeries in Africa. Hastings Cent Rep. 2012 Nov-Dec;42(6):19–27.

Sexual and Gender-based Violence

Sexual and gender-based violence (SGBV) is ongoing and has been used as a weapon of war in Somalia. In Somali society, rape victims are highly stigmatized and sexual assaults often go unreported. After an assault, survivors may isolate themselves, largely withdrawing from social life. Additionally, the health complications resulting from SGBV can be severe. Sexual assault can lead to pregnancy complications, as well as mental health issues including anxiety disorders, depression, post-traumatic stress disorder (PTSD), and somatic symptoms 37.

While refugee camps in countries of asylum provide some security and basic services, camp settings can increase the risk of SGBV. Lack of livelihood opportunities often forces women into poverty and situations where exploitation and abuse are increasingly common. Additionally, women are often responsible for obtaining food and firewood, drawing them away from secured areas. Lastly, insufficient police presence and high staff turnover negatively impact support services available to refugees 38.

Medical Screening of US-bound Refugees

Somali refugees who have been identified for resettlement to the United States receive a required medical examination. Depending on the country of processing, refugees may receive additional health checks (Figure 5). As outlined below, the full required medical examination occurs 3 to 6 months before departure; the pre-departure medical screening (PDMS) and pre-embarkation checks (PEC), if conducted, occur closer to or immediately before departure for the United States. As the security clearance process is lengthy, many Somali refugees referred for resettlement to the United States must undergo repeat medical screenings if the required medical exam expires prior to departure.

Figure 5: Medical Assessment of US-bound Refugees * “Class B1 TB, Pulmonary” refers to an admissible medical condition in which there is an abnormal screening chest x-ray but negative sputum TB smears and cultures, or to TB diagnosed by the panel physician and fully treated by directly observed therapy.

The medical assessment of US-bound refugees consists of three key components: the overseas medical examination, pre-departure medical screening, and fit to fly pre-embarkation checks. The overseas medical examination occurs no more than 6 months before departure for all refugees, and screens for inadmissible conditions. The pre-departure medical screening occurs within three weeks of departure for refugees with significant complex medical conditions (as needed), and those with Class B1 TB. Lastly, fit to fly pre-embarkation checks generally occur 24-48 hours (no more than 72 hours) prior to departure. All refugees undergo fit to fly checks, and are given presumptive albendazole and ivermectin (depending on the country of departure).

Overseas Medical Examination

The overseas medical examination is mandatory for all refugees coming to the United States and must be performed according to CDC’s Technical Instructions. This examination is generally performed approximately 6 months before initial scheduled resettlement; the medical exam may be repeated if resettlement is delayed. Generally, the medical exam is valid for 6 months. However, the medical exam is only valid for 3 months for those with Class B1 conditions. The purpose of this overseas medical examination is to identify applicants with inadmissible health-related conditions. These include, but are not limited to, mental health disorders with harmful behavior, substance abuse, and specific sexually transmitted infections (if untreated). Active tuberculosis (TB) disease (untreated or incompletely treated) is an inadmissible condition of great concern due to its infectious potential and public health implications.

Somali refugees are processed in several countries including, but not limited to, Kenya, Ethiopia, Uganda, and South Africa. The required medical examinations for Somali refugees, including those conducted in Kenya, Ethiopia, Uganda, and South Africa, are conducted by physicians from the International Organization for Migration (IOM). In other countries, examinations may be performed by local panel physicians appointed by the US Embassy.

TB screening and treatment are critical components of the overseas medical examination. All Somali refugees referred for resettlement to the United States are required to be evaluated, and treated if necessary, for TB before coming to the United States. Panel physicians are required to conduct these mandatory screenings in accordance with the CDC Tuberculosis Screening and Treatment Technical Instructions (TB TIs) using Cultures and Directly Observed Therapy (DOT) for Panel Physicians.

CDC provides the technical oversight and training for all panel physicians, regardless of affiliation. All panel physicians are required to follow the Technical Instructions developed by CDC. In addition, in countries where IOM conducts the examination, refugees also receive a PDMS and PEC.

Information collected during the refugee medical examination is reported to CDC’s Electronic Disease Notification system (EDN) and sent to US state health departments in states where refugees resettle.

Pre-departure Medical Screening

Depending on the country of processing, PDMS is conducted approximately 2 weeks before departure for the United States for refugees previously diagnosed with a Class B1 TB, pulmonary condition (abnormal chest x-ray with negative sputum TB smears and cultures, or pulmonary TB diagnosed by panel physician and treated by directly observed therapy). The screening includes a medical history and repeat physical exam. This screening primarily focuses on TB signs and symptoms, and includes a chest x-ray and sputum collection for sputum TB smears (if required). Technical Instructions for Tuberculosis Screening and Treatment, which include more information on pre-departure medical screenings, are available on CDC’s website. Depending on the country of processing, refugees with other chronic or complex medical conditions may receive pre-departure evaluation to assess fitness for travel.

Pre-embarkation Checks

Depending on the country of processing, IOM physicians perform a PEC, or “fit to fly” assessment, within 72 hours (often 24-48 hours) of the refugee’s departure for the United States. PECs are conducted to determine fitness for travel, and to administer presumptive therapy for intestinal parasites and malaria.

Vaccination Program for US-bound Refugees

In addition to vaccines received through national immunization programs and NGO vaccination campaigns, Somali refugees are likely to receive vaccines as part of the voluntary Vaccination Program for US-bound Refugees. Depending on age, vaccine availability, and other factors, refugees may receive vaccines to protect against hepatitis B, rotavirus, Haemophilus influenzae type b, pneumococcal disease, diphtheria, pertussis, tetanus, polio, measles, mumps, and rubella. Hepatitis B surface antigen testing is conducted for refugees receiving hepatitis B vaccine, and positive results are documented on the DS forms. Those with hepatitis B infection require follow-up after arrival in the United States. For those without infection, the hepatitis B vaccine series is usually initiated before departure, and vaccination should be completed after arrival, according to an acceptable ACIP schedule.

All vaccines administered through the Vaccination Program for US-bound Refugees, as well as records of historical (prior) vaccines provided by NGOs and national programs, are documented on the DS-3025 (Vaccination Documentation Worksheet) form. US providers are strongly encouraged to review each refugee’s records to determine which vaccines were administered overseas.

Additional information about the CDC-Bureau for Population, Refugees, and Migration (PRM) Vaccination Program for US-bound Refugees is available on CDC’s Immigrant, Refugee, and Migrant Health website.

Presumptive Therapies for Parasitic Infections

Depending on the country of processing and place of birth, Somali refugees may receive pre-departure presumptive albendazole for soil-transmitted helminthic infection, ivermectin for strongyloidiasis, praziquantel for schistosomiasis, and/or artemether-lumefantrine (Coartem®) for malaria. Refugees receive presumptive treatment via DOT at PEC. US providers should refer to each refugee’s PDMS form to determine which therapies for parasitic infections were administered overseas.

Additional information regarding presumptive therapy for parasitic infections can be found here.

Health Conditions to Consider during Post-arrival Medical Screening

CDC recommends that refugees receive a post-arrival medical screening (domestic medical examination) within 30 days of arrival in the United States. The Department of Health and Human Services’ Office of Refugee Resettlement (ORR) supports medical screening for those who have been granted refugee status. The purpose of these comprehensive examinations is to identify conditions for which refugees may not have been screened during their overseas medical examinations and to introduce refugees to the U.S. healthcare system. CDC provides guidelines and recommendations for the domestic medical examination of newly arrived refugees. State refugee health programs determine who conducts the examinations within their jurisdictions. Screening examinations may be performed by health department personnel, private physicians, or federally qualified health centers. Most state health departments collect data from the domestic screening.

Communicable Diseases

Infectious Hepatitis

Chronic hepatitis B virus (HBV) infection is prevalent worldwide, particularly in Asia and sub-Saharan Africa, where many US-bound refugees originate. Between 15% and 40% of those infected with chronic HBV infection develop long-term sequelae; however, the majority of infections are asymptomatic 39. CDC reports that East Africa, including Somalia and countries where Somali refugees are being processed, has a high intermediate prevalence of HBV (5%–7%) 40. In one study of adult Somali Bantu refugees (n=707) living in Kakuma, Kenya, PCR analysis detected HBV DNA in 5.5% of serum samples 41.

Among 1,234 adult refugee patients screened in Washington State, HBV infection prevalence was substantially higher among Somali speakers (12.4%, n=386) than in other refugee groups 39. Similarly, high HBV infection prevalence has been observed among Somali refugees in Minnesota. From 1999 to 2016, 18,422 Somali refugees received a domestic medical screening, of whom 7% (n=1,240) tested positive for HBsAg, indicating HBV infection 42. Notably, prevalence was highest among adults 45–64 years of age (14%) and lowest among children under 5 (1%) 42. Approximately 42% of those not infected with HBV were immune, due to either natural infection or vaccination. A recent study of refugee children from Somalia (n=2,878) found that 3.6% had HBV infection 43. Additionally, researchers found that the majority of cases were in children over 5 years of age, likely reflecting increasing childhood vaccination rates 43.

Hepatitis C virus (HCV) infection is also a concern for some US-bound refugees. East Africa, including Somalia, has a moderate prevalence of HCV (1.5%–3.5%) 40. However, refugees processed in Yemen may be at increased risk, as Yemen has a high prevalence of HCV (>3.5%) 40. Among Somali Bantu refugees residing in Kakuma, Kenya, 0.85% of those tested (n=707) were found to have HCV DNA in their serum 41. Similarly, among Somali refugees resettled in Minnesota between 2004 and 2016, 44 individuals, or roughly 1% of those tested during the domestic medical screening (n=2,978), were positive for HCV 42. Additionally, refugees ≥45 years of age had the highest prevalence, while those <25 years of age had the lowest prevalence 42.


Somalia and countries where Somali refugees are being processed for resettlement to the United States have a high TB burden. Depending on the country, between 1.3% and 5.2% of all new cases are multidrug-resistant, with up to 41% of previously treated TB cases classified as multidrug-resistant. Table 1 describes, in detail, the TB burden in Somalia and key countries of asylum for Somali refugees.

Table 1: Select Data Describing National Tuberculosis Burden in Somalia and Countries of Asylum, 2015

Table 1: Select Data Describing National Tuberculosis Burden in Somalia and Countries of Asylum, 2015
Country Incidence Rate (cases per 100,000 population) Multi-drug-resistant TB
% of new cases % of retreatment cases
Somalia 274 5.2 41
Djibouti 378 4.3 34
Ethiopia 192 2.7 14
Kenya 233 1.3 9.4
Uganda 202 1.6 12
South Africa 843 3.5 7.1
Yemen 48 2.3 18

Source: World Health Organization Tuberculosis Country Profiles, 2016 44

For additional information regarding TB burden estimates and data in Somalia or countries where Somali refugees have sought asylum or are being processed, please see the WHO Tuberculosis Country Profilesexternal icon.

Before departing for the United States, all refugees are screened for TB and receive treatment, if necessary. As part of the recommended domestic medical screening, newly arrived refugees are also screened for TB. Among 18,308 Somali refugees screened for TB in Minnesota from 1999 to 2016, 43% (7,850) were diagnosed with latent TB infection (LTBI), with prevalence increasing with age. Only 2% (287) were diagnosed with active TB disease (Table 2) 42. Overall, the prevalence of active TB disease diagnosed during the domestic medical screening has decreased since 1999 and has remained below 1.0% since 2007 42.

Table 2: Tuberculosis Screening and Infection among Somali Refugees to Minnesota, 1999–2016

Table 2: Tuberculosis Screening and Infection among Somali Refugees to Minnesota, 1999–2016
Age at US Arrival Screened for TB Infection*
Number Screened Diagnosed with LTBI Diagnosed with Active TB Disease**
N N (%) N (%)
<5 years 1,317 146 (11%) 3 (<1%)
5–14 years 4,081 859 (21%) 39 (1%)
15–24 years 7,370 3,624 (49%) 145 (2%)
25–44 years 2,891 1,678 (58%) 45 (2%)
45–64 years 2,048 1,226 (60%) 39 (2%)
≥65 years 601 317 (53%) 16 (3%)
Overall 18,308 7,850 (43%) 287 (2%)

*Tuberculin skin test (TST) or interferon-gamma release assay (IGRA)
**Active TB disease classified as either pulmonary or extrapulmonary
Source: Minnesota Department of Health 42

Clinicians should approach TB diagnosis with sensitivity and confidentiality. Individuals who have been diagnosed with active TB disease often face a lifetime of stigma, even after successful treatment completion. Some Somalis may associate TB with stress, loss of faith, God’s will, or sorcery. Standard antibiotic treatments for TB are often combined with traditional remedies, as well as prayer 45.

Parasitic Infections

Intestinal Parasites

Intestinal parasites are a concern for many recently arrived refugees, including Somali refugees. From 1999 to 2016, 18% (n=15,711) of new Somali arrivals were found to be infected with at least one pathogenic parasite, with Giardia being the most common pathogen (Table 3) 42. Infection rates were highest among Somali refugees who arrived from 1999 to 2004 (25%) 42.

Table 3: Ova and Parasite (O&P) Testing Results among Somali Refugees in Minnesota, 1999–2016

Ova and Parasite (O&P) Testing Results among Somali Refugees in Minnesota, 1999–2016
Screening Result for Intestinal Parasites Year of US Arrival
1999–2004 2005–2010 2011–2016 1999–2016
Screened 5864 6496 3351 15711
No Pathogenic Parasites Found 4410 (75%) 5568 (86%) 2765 (83%) 12947 (82%)
Pathogenic Parasite(s) Found 1454 (25%) 928 (14%) 586 (17%) 2764 (18%)
Giardia 305 (5%) 411 (14%) 395 (12%) 1111 (7%)
Trichuris 507 (9%) 265 (4%) 9 (<1%) 781 (5%)
Entamoeba histolytica 168 (3%) 171 (3%) 117 (3%) 456 (3%)
Hymenolepis 81 (1%) 75 (1%) 45 (1%) 201 (1%)
Dientamoeba 13 (<1%) 63 (1%) 56 (2%) 132 (1%)
Other Pathogenic Parasites** 51 (1%) 29 (<1%) 26 (1%) 98 (1%)

Source: Minnesota Department of Health 42
*Percent of those screened
**Includes Ascaris, Cryptosporidium, Cyclospora, Diphyllobothrium, hookworm, Fasciola, pinworm, Schistosoma, Strongyloides, and Taenia

Soil-transmitted infections (ascariasis, trichuriasis, and hookworm) are common among refugees, and most refugees receive presumptive albendazole treatment prior to departure. Strongyloidiasis and schistosomiasis are of particular concern due to high prevalence, risk of morbidity and mortality, and long latency or infection periods. In a cohort (n=100) of US-bound Somali Bantu refugees, 73% tested seropositive for schistosomiasis, with the majority of cases caused by Schistosoma haematobium. Additionally, 23% tested seropositive for strongyloidiasis, and 21% of all individuals tested seropositive for both schistosomiasis and strongyloidiasis. In this cohort, age was associated with increased risk of infection, with adults (≥18 years of age) being 3 times more likely to be seropositive for schistosomiasis. Additionally, individuals ≥30 years of age were 2.5 times more likely to be seropositive for strongyloidiasis than those <30 years of age [46]. Before arrival in the United States, most Somali refugees receive presumptive treatment for Strongyloides (ivermectin) and schistosomiasis (praziquantel). Somali refugees who have lived in or are departing from areas endemic for Loa loaexternal icon do not receive ivermectin before departure, due to risk of encephalopathy. However, most Somali refugees receive ivermectin, as Somalia and most countries where Somali refugees are processed are not endemic for Loa loa.

Screening data from the Minnesota Department of Health indicate that ~2% of Somali refugees screened (n=4,870) had a positive strongyloides serology after arrival, suggesting the effectiveness of the presumptive treatment program 42. Similarly, there was a noticeable decrease in schistosomiasis prevalence after arrival. At domestic screening, 4% of Somali refugees screened (n=2,578) had positive schistosoma serologies 42. Among Somali refugees, the most common clinical presentation for schistosomiasis is asymptomatic hematuria, either gross or microscopic. However, schistosomiasis can cause a broad range of signs and symptoms. Schistosomiasis should be considered in any individual of Somali descent who has lived in or visited endemic areas and presents with, or is found to have, hematuria or any unexplained symptoms 47.


Malaria is endemic in the Horn of Africa, including southern Somalia and in countries where Somali refugees are being processed for resettlement. However, prevalence among new arrivals is very low. US-bound Somali refugees are presumptively treated with artemether-lumefantrine (Coartem®) for malaria at PEC, unless contraindicated. Presumptive malaria treatment is documented on each refugee’s PDMS forms.

Non-communicable Diseases

Non-communicable diseases (NCDs) are becoming increasingly common among refugees, including Somalis, resettled to the United States. A recent study among refugees of multiple ethnicities resettled to a northeastern US city (n=180) found that more than half (51.1%) of all adult refugees in the study had been diagnosed with at least one chronic NCD, and 9.5% had three or more NCDs 48. Behavioral health diagnoses, such as depression and PTSD (15.0%), and hypertension (13.3%) were the most common NCDs 48. Additionally, more than half of all adult refugees were overweight or obese (54.6%) 48. Among Somali patients, researchers reported a high prevalence of cardiovascular risk factors, with a significantly higher prevalence of diabetes mellitus (12.1% vs 5.3%) and prediabetes (21.3% vs 17.2%) than non-Somali patients 49. It is likely that changes in diet and physical activity related to migration and assimilation contribute to the high prevalence of obesity, diabetes mellitus, and cardiovascular risk factors among Somali immigrants and refugees 49.


Anemia is common among Somali refugee children, and can be caused by iron deficiency, parasitic infections, thalassemias, and hemoglobinopathies 43. In a study of refugee children resettled to Colorado, Philadelphia (Pennsylvania), Minnesota, and Washington State from 2006 to 2012, 21.4% (n=2,751) of Somali refugee children <18 years of age were anemic 43. In this study population, anemia was prevalent in both male (20.4%) and female (22.5%) children, and was most common in children <5 years of age 43. Domestic screening results from Minnesota also indicate a high prevalence of anemia among Somali refugees of all ages. From 1999 to 2016, 9,641 male Somali refugees and 9,447 female Somali refugees were screened for anemia. Screening revealed that 19% of all women and 7% of all men were anemic, according to reference ranges determined by WHO pdf icon[PDF – 6 pages]external icon 42. Overall, children <5 years of age had the highest prevalence of anemia, with 28% of boys and 25% of girls being anemic. Among adults 25–44 years of age, anemia prevalence differed significantly for men and women, with 2% of men and 29% of women classified as anemic 42.


Lead exposure and elevated blood lead levels are a concern among Somali refugee children, both before and after resettlement. Prior to arrival in the US, refugees may have been exposed cottage industries that use lead in an unsafe manner, and lead-containing products such as herbal remedies, cosmetics, or spices 50, 51. In the US, refugees, including Somali refugees, often live in substandard housing, where environmental lead may be encountered. Additionally, imported cosmetics, candies, and herbal remedies may contain lead. Among 2,878 Somali refugee children living in Colorado, Minnesota, Washington, and Philadelphia (Pennsylvania), approximately 20% had blood lead levels >5 micrograms per deciliter, while 1.7% of those in this cohort had lead levels ≥10 micrograms per deciliter 43. Within 3–6 months of resettlement, a follow-up blood lead test should be conducted on all refugee children aged 6 months–6 years of age, regardless of the initial screening BLL result. Complete lead screening recommendations for refugee children, and information on potential lead exposures, are provided in the CDC Lead Screening during the Domestic Medical Examination for Newly Arrived Refugees. For additional information on lead poisoning and prevention, see the CDC Lead website.


Malnutrition is common in Somali refugees, especially children, due to lack of nutritious food. In a 2011 survey of Somali refugee children (<5 years old) in Bulo Bacte section of Dagahaley refugee camp in Dadaab, global acute malnutrition was observed in 13.4% (n=6,488) of children measuring 67 to <110 cm in height, while severe acute malnutrition was observed in 3.0% of children. Among children measuring 110 to 140 cm in height, 9.8% of those surveyed met criteria for entry into the camp nutritional program 52.

In a 2016 study looking at refugee children resettled in Washington State (n=219), researchers found that nearly half of all Somali refugee children (≤10 years of age) had some degree of stunting or wasting indicated in their overseas medical examination 53. Table 4 outlines the nutritional status of Somali refugee children under 5 years of age, as well as children between 5 and10 years of age, before resettlement.

Table 4: Nutritional Status at Overseas Medical Examination among Somali Refugee Children Resettled to Washington State, July 2012–June 2014

Ova and Parasite (O&P) Testing Results among Somali Refugees in Minnesota, 1999–2016
Nutritional Status <5 years
5–10 years
All ages
Stunting 26.2% 15.8% 20.5%
Wasting 23.2% 34.2% 29.2%
Healthy Weight 58.6% 59.2% 58.9%
Overweight 8.1% 4.2% 5.9%
Obesity 10.1% 2.5% 5.9%

Source: Dawson-Hahn et al. (2016) 53

Overall, Somali refugee children have a significantly higher prevalence of wasting and stunting, and lower prevalence of obesity, than low-income children in Washington State 53.

Mental Health

Mental health issues may be common in Somali refugees being resettled in the United States. In a community-based cross-sectional survey of adult refugees in Melkadida refugee camp in Southeast Ethiopia, more than one third (38.3%) of those surveyed (n=847) reported symptoms consistent with depression 54. Researchers also found that displacement as a refugee, lack of secure housing, witnessing the murder of family or friends, and other traumatic events were significantly associated with depression among camp residents 54.

Mental health issues continue to be a challenge for Somali refugees after resettlement. In a study of Somali refugees living in Finland (n=128), exposure to war trauma and post-resettlement discrimination were associated with greater PTSD and depressive symptoms 55. However, religiosity was found to be protective among older Somali refugees, with war trauma not associated with high levels of PTSD 55. Among adolescents, data collected from Somali refugees resettled in the United States (n=135) indicate that history of trauma and acculturation challenges directly diminish well-being 56.

Vaccine Hesitancy

Immunization is generally well received by refugee groups, including Somalis. In recent years, some Somali community members in the United States have expressed concern about the disproportionately high number of Somali children enrolled in early childhood special education programs for autism. Community members were drawn to information promoting the misconception that autism was linked to the MMR vaccine. Additionally, anti-vaccine proponents reached out directly to the Somali community, bolstering fears that MMR vaccine caused autism, and encouraging Somali parents to refuse vaccination.

From 2004 to 2010, MMR vaccine coverage among Somali children in Minnesota dropped from 91% to 54% 55. More recently, coverage rates have begun to improve, and the majority of new Somali arrivals support MMR vaccination 14. In early 2017, Minnesota health officials reported an outbreak of measles in the Minneapolis-St. Paul metropolitan area. As of August 2017, Minnesota had recorded 79 confirmed measles cases. Of those, 64 were in Somali Minnesotans, and most (n=74) were in unvaccinated or undervaccinated individuals 58.

Clinicians who administer childhood vaccines should be respectful of parent concerns, and should approach discussions about immunization with cultural humility and empathy 59. Clinicians should also be aware that vaccination decisions may be made outside a clinical setting. Somali parents may be influenced by community members, including persons they may not know personally but who belong to and identify with the local Somali community. Clinicians should aim to build trust with patients and their families, as well as build relationships with leaders in the Somali community 14.

Additional Resources for Providers:

Continuity of Care

The domestic medical screening allows clinicians to identify individuals who may require additional or specialty care. From 1999 to 2016, 19,280 referrals were given to Somali patients (Table 5) 42. Referrals to dental care and primary care providers (including pediatrics) were the most common, followed by ophthalmology/optometry and public health nursing 42. Most often, referrals to public health nursing were related to the management of LTBI 42.

Table 5: Clinical Referrals among Somali Refugees to Minnesota, 1999–2016

Table 5: Clinical Referrals among Somali Refugees to Minnesota, 1999–2016
Referral* Males (n=9,768) Females (n=9,512) Overall (n=19,280)
N (%) N (%) N (%)
Dentist 5,007 (51%) 5,182 (54%) 10,189 (53%)
Primary Care 4,790 (49%) 5,015 (53%) 9,805 (51%)
Public Health Nurse 885 (9%) 700 (7%) 1,585 (8%)
Ophthalmology/Optometry 704 (7%) 801 (8%) 1,505 (8%)
Obstetrics/Gynecology n/a 393 (4%) n/a
Gastroenterology 104 (1%) 79 (1%) 183 (1%)
Infectious Disease 65 (1%) 51 (1%) 116 (1%)
Audiology (Hearing) 60 (1%) 55 (1%) 115 (1%)
Mental Health 34 (<1%) 34 (<1%) 68 (<1%)