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Select CDC NARMS Publications

Publications, 2010-2016

Salmonella, non-typhoidal serotypes

  • Grinnell M, Provo G, Marsden-Haug N, Stigi KA, Debress E, Crarey E, et al. Outbreak of Salmonella Heidelberg infections linked to a single poultry producer — 13 states, 2012-2013. MMWR Morb Mortal Wkly Rep. 2013 Jul 12; 62(27):553–6.
  • Glenn LM, Lindsey RL, Folster JP, Pecic G, Boerlin P, Gilmour MW, et al. Antimicrobial resistance genes in multidrug-resistant Salmonella enterica isolated from animals, retail meats, and humans in the United States and Canada. Microb Drug Resist. 2013 Jun;19(3):175–84. DOI
  • Sandt CH, Fedorka-Cray PJ, Tewari D, Ostroff St, Joyce K, M’ikanatha NM. A comparison of non-typhoidal Salmonella from humans and food animals using pulsed-field gel electrophoresis and antimicrobial susceptibility patterns. PLoS ONE. 2013 Oct 30;8(10):e77836. DOI
  • Sjolund-Karlsson M, Howie R, Blickenstaff K, Boerlin P, Ball T, Chalmers G, et al. Occurrence of β-Lactamase genes among non-Typhi Salmonella enterica isolated from humans, food animals, and retail meats in the United States and Canada. Microb Drug Resist. 2013 Jun;19(3):191–7. DOI
  • Medalla F, Hoekstra RM, Whichard JM, Barzilay EJ, Chiller TM, Joyce K, et al. Increase in resistance to ceftriaxone and nonsusceptibility to ciprofloxacin and decrease in multidrug resistance among Salmonella strains, United States, 1996–2009. Foodborne Pathog Dis. 2013;10(4):302–309. DOI
  • Hoffmann M, Zhao S, Pettengill J, Luo Y, Monday SR, Abbott J, et al. Comparative genomic analysis and virulence differences in closely related Salmonella enterica serotype Heidelberg isolates from humans, retail meats, and animals. Genome Biol Evol. 2014 May;6(5): 1046–1068. DOI
  • Krueger AL, Greene SA, Barzilay EJ, Henao O, Vugia D, Hanna S, et al. Clinical outcomes of nalidixic acid, ceftriaxone, and multidrug-resistant nontyphoidal Salmonella infections compared with pansusceptible infections in FoodNet sites, 2006–2008. Foodborne Pathog Dis. 2014;11(5):335–341. DOI
  • Sjolund-Karlsson M, Howie R, Crump J, Whichard J. Interpretive criteria for Fluoroquinolones and Salmonella enterica: suitable disk diffusion breakpoints for Levofloxacin and Ofloxacin. J Clin Microbiol. 2014 Mar;52(3); 877–84. DOI
  • Rickert-Hartman R, Folster JP. Ciprofloxacin-resistant Salmonella enterica serotype Kentucky sequence type 198 [letter]. Emerg Infect Dis. 2014;20(5):910–911. DOI
  • Sjölund-Karlsson M, Howie RL, Crump JA, Whichard JM. Fluoroquinolone susceptibility testing of Salmonella enterica: detection of acquired resistance and selection of zone diameter breakpoints for levofloxacin and ofloxacin. J Clin Microbiol. 2014;52(3):877–887. DOI
  • O’Donnell AT, Vieira AR, Huang JY, Whichard JM, Cole D, Karp BE. Quinolone-resistant Salmonella enterica serotype Enteritidis infections associated with international travel. Clin Infect Dis. 2014:59(9): e139–e141. DOI
  • Medalla FA, Weidong G, Mahon BE, Fullerton K, Folster JP, Griffin PM, et al. 828 Incidence of antimicrobial-resistant nontyphoidal Salmonella infections in the United States, 2004–2011. Open Forum Infect Dis. 2014;1(suppl_1):S237–S238. DOI
  • Folster JP, Tolar B, Pecic G, Sheehan D, Rickert R, Hise K, et al. Characterization of blaCMY plamids and their possible role in source attribution of Salmonella enterica serotype Typhimurium infections. Foodborne Pathog Dis. 2014;11(4):301–306. DOI
  • Oneko M, Kariuki S, Muturi-Kioi V, Otieno K, Otieno VO, Williamson JM, et al. Emergence of community-acquired, multidrug-resistant invasive nontyphoidal Salmonella disease in rural Western Kenya, 2009–2013. Clin Infect Dis. 2015 Nov 1;61 Suppl 4:S310–6. DOI
  • Folster JP, Campbell D, Grass J, Brown AC, Bicknese A, Tolar B, et al. Identification and characterization of multidrug-resistant Salmonella enterica serotype Albert isolates in the United States. Antimicrob Agents Chemother. 2015 May;59(5):2774–9. DOI
  • Laufer AS, Grass J, Holt K, Whichard JM, Griffin PM, Gould LH. Outbreaks of Salmonella infections attributed to beef — United States, 1973-2011. Epidemiol Infect. 2015 Jul;143(9):2003–13. DOI
  • Routh JA, Pringle J, Mohr M, Bidol S, Arends K, Adams-Cameron M, et al. Nationwide outbreak of multidrug-resistant Salmonella Heidelberg infections associated with ground turkey: United States, 2011. Epidemiol Infect. 2015 Apr 13;143:3227–3234. DOI
  • Medalla F, Gu W, Mahon BE, Judd M, Folster J, Griffin PM,  RM. Estimated incidence of antimicrobial-resistant nontyphoidal Salmonella infections in the United States, 2004–2012. Emerg Infect Dis. Dec 2016;23(1): 29–37. DOI
  • Angelo KM, Reynolds J, Karp BE, Hoekstra RM, Scheel CM, Friedman C. Antimicrobial resistance among nontyphoidal Salmonella isolated from blood in the United States, 2003–2013. J Infect Dis. 2016 Nov 15; 214(10):1565-1570. DOI
  • McDermott PF, Tyson GH, Kabera C, Chen Y, Li C, Folster JP, et al. Whole-genome sequencing for detecting antimicrobial resistance in nontyphoidal Salmonella. Antimicrob Agents Chemother. 2016 Aug 22;60 (9):5515–20. DOI
  • Brown A, Grass JE, Richardson LC, Nisler AL, Bicknese AS, Gould LH. Antimicrobial resistance among Salmonella that caused foodborne disease outbreaks: United States, 2003–2012. Epidemiol Infect. 2016 Dec 06; 145(4):766–774. DOI
  • Cartwright EJ, Nguyen T, Melluso C, Ayers T, Lane C, Hodges A, et. Al. A multistate investigation of antibiotic-resistant Salmonella enterica serotype I 4, [5],12:i:- infections as part of an international outbreak associated with frozen feeder rodents. Zoonoses Public Health. 2016 Feb;63(1):62–71. DOI
  • Vieira AR, Grass J, Fedorka-Cray PJ, Plumblee JR, Tate H, Cole DJ. Attribution of Salmonella enterica serotype Hadar infections using antimicrobial resistance data from two points in the food supply system. Epidemiol Infect. 2016 Jul;144(9):1983–1990. DOI
  • Gieraltowski L, Higa J, Peralta V, Green A, Schwensohn C, Rosen H, et al. National outbreak of multidrug resistant Salmonella Heidelberg infections linked to a single poultry company. PLoS One. 2016 Sep 15;11(9):e0162369. DOI

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Salmonella serotype Typhi (the agent of Typhoid Fever) and Salmonella serotype Paratyphi

  • Sjolund-Karlsson M, Howie R, Rickert R, Newton A, Gonzalez-Aviles G, Crump JA. Plasmid-mediated quinolone resistance in isolates of Salmonella enterica serotype Typhi, United States. Intl J Antimicrob Agents. 2015 Jan;45(1):88–90. DOI
  • Judd MC, Grass JE, Mintz ED, Bicknese A, Mahon BE. Salmonella enterica Paratyphi A infections in travelers returning from Cambodia, United States [letter]. Emerg Infect Dis. 2015 Jun;21(6):1089–1091. DOI PubMed
  • Date KA, Newton AE, Medalla F, Blackstock A, Richardson L, McCullough A, et al. Changing patterns in enteric fever incidence and increasing antibiotic resistance of enteric fever isolates in the United States, 2008–2012. Clin Infect Dis. 2016 Aug 1;63(3):322–9. DOI


Escherichia coli

  • Taylor EV, Nguyen TA, Machesky KD, Koch E, Sotir MJ, Bihm SR, et al. Multistate outbreak of Escherichia coli O145 infections associated with romaine lettuce consumption, 2010. J Foot Prot. 2013 Jun;76(6):939–44. DOI
  • Folster JP, Pecic G, Stroika S, Rickert R, Whichard JM. Changing plasmid types responsible for extended spectrum cephalosporin resistance in Escherichia coli O157:H7 in the United States, 1996–2009. J Glob Antimicrob Resist. 2014;2(2): 87–91. DOI
  • Vasquez AM, Montero N, Laughlin M, Dancy E, Melmed R, Sosa L, et al. Investigation of Escherichia coli Harboring the mcr-1 resistance gene – Connecticut, 2016. MMWR. 2016 Sept 26;65(36):979–80.


  • Katz LS, Petkau A, Beaulaurier J, Tyler S, Antonova ES, Turnsek MA, et al. Evoluntionary dynamics of Vibrio cholera O1 following a single-source introduction to Haiti. mBio. 2013 July 2;4(4):e00398–13.
  • Folster JP, Katz L, McCullough A, Parsons MB, Knipe Kristen, Sammons SA, et al. Multidrug-resistant incA/C plasmid in Vibrio cholera from Haiti [letter]. Emerg Infect Dis. 2014 Nov; 20(11):1951–1952. DOI


  • Ge B, Wang F, Sjolund-Karlsson M, McDermott PF. Antimicrobial resistance in Campylobacter: Susceptibility testing methods and resistance trends. J Microbiol Methods. 2013 Oct;95(1):57­­–67. DOI
  • Zhao S, Tyson GH, Chen Y, Li C, Mukherjee S, Young S, et al. Whole-genome sequencing analysis accurately predicts antimicrobial resistance phenotypes in Campylobacter spp. Appl Environ Microbiol. 2015 Oct 30;82(2): 459–66. DOI


  • Fleming-Dutra KE, Friedman CR, Hicks LA. Early Azithromycin treatment to prevent severe lower respiratory tract illnesses in children [letter]. JAMA. 2016 May 17;315(19):2121–2122. DOI JAMA
  • Collignon PC, Conly JM, Andremont A, McEwen SA, Aidara-Kane A, World Health Organization Advisory Group, Bogota Meeting on Integrated Surveillance of Antimicrobial Resistance (WHO-AGISAR), et al. World Health Organization ranking of antimicrobials according to their importance in human medicine: a critical step for developing risk management strategies to control antimicrobial resistance from food animal production. Clin Infect. Dis. 2016 Oct 15;63(8):1087-83. PubMed
  • Folster JP, Grass JE, Bickenese A, Taylor J, Friedman CR, Whichard JM. Characterization of resistance genes and plasmids from outbreaks and illness clusters caused by Salmonella resistant to ceftriaxone in the United States, 2011­–2012. Microb Drug Resist. 2017 Mar;23(2): 188­–193. DOI

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