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Isolates Currently Available

Download ABCs Isolate Bank: Isolates and Information Currently Available (30 KB, 2 pages)

Isolates as of February 2, 2011

Organism Year (number of unique strains) Demographic and clinical data available Laboratory testing results available
Streptococcus pneumoniae 1995 (n=1752) > Age groups: < 1 yr, 1 yr, 2-4 yrs, 5-17 yrs, 18-34 yrs, 35-49 yrs, 50-64 yrs, ≥ 65 yrs
> Source: CSF, blood or other sterile site
> Serotype
> MIC§ results to the following antibiotics: amoxicillin, cefaclor, cefotaxime, chloramphenicol, clindamycin, erythromycin, meropenem, ofloxacin, penicillin, rifampin, Synercid, TMP/Sulfa, vancomycin
1996 (n=1328)
1997 (n=1721)
> Age groups: < 1 yr, 1 yr, 2-4 yrs, 5-17 yrs, 18-34 yrs, 35-49 yrs, 50-64 yrs, ≥ 65 yrs
> Source: CSF, blood or other sterile site
> Serotype
> MIC§ results to the same antibiotics as above except: addition of  tetracycline
1998 (n=4095) > Age groups: < 1 yr, 1 yr, 2-4 yrs, 5-17 yrs, 18-34 yrs, 35-49 yrs, 50-64 yrs, ≥ 65 yrs
> Source: CSF, blood or other sterile site
> Serotype
> 1998: MIC§ results to the following antibiotics: amoxicillin, cefotaxime, cefuroxime, chloramphenicol, clindamycin, erythromycin, levofloxacin, meropenem, penicillin, rifampin, Synercid, tetracycline, TMP/Sulfa, trovafloxacin, vancomycin
1999 (n=3980)
2000 (n=3865)
1999/2000: same as 1998 except for MIC testing of fluoroquinolones (FQ): gatifloxacin and levofloxacin only
2001 (n=3119)
2002 (n=3187)
2003 (n=3284)
2001/2002/2003: same MIC as 1998 except FQs: levofloxacin, ciprofloxacin, and sparfloxacin only. Linezolid added.
2004 (n=3132)
2005 (n=3562)
2006 (n=3559)
2007 (n=3512)
2008 (n=3472)
2004/2005/2006/2007/2008/2009/2010 same as 1998 except for MIC testing of telithromycin, and ceftriaxone added.
Group A Streptococcus 1995 (n=280)
1996 (n=343)
1997 (n=674)
1998 (n=627)
1999 (n=838)
2000 (n=542)
2001 (n=419) 
2002 (n=852)
2003 (n=1074)
2004 (n=864)
2005 (n=920)
2006 (n=967)
2007 (n=958)
2008 (n=952)
> Presence or absence of the following severe infection: NF*, STSS**, puerperal sepsis > emm type
> Presence or absence of sof
Group B Streptococcus 1995 (n=23)
1996 (n=42)
1997 (n=65)
1998 (n=426)
1999 (n=518)
2000 (n=321)
2001 (n=310)
2002 (n=721)
2003 (n=1144)
2004 (n=1331)
2005 (n=1469)
2006 (n=1304)
2007 (n=1191)
2008 (n=1278)
> Source: CSF, blood or other sterile site
> For age groups:
<1 year: onset [early ("0-6 days"), late ("7-89 days") or other (≥90 days)];
1-49 yrs: pregnant (yes, no, unknown);
50-64 yrs and ≥ 65 yrs: age group only
> Serotype

*Necrotizing fasciitis

** Streptococcal toxic shock syndrome

§ Minimal Inhibitory Concentration

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Explanation of Antibiotic Abbreviations in Isolates Table

Sorted by abbreviation:

AMO

AMP

CFX

CFT

CHL

CIP

CLA

CLI

COT

CZL

ERY

FAC

FOX

GFX

IMI

LFX

LZO

MER

OFL

PEN

RIF

SPA

SYN

TAX

TEL

TET

TVA

VAN

Amoxicillin

Ampicillin

Cefuroxime

Ceftriaxone

Chloramphenicol

Ciprofloxacin

Clarithromycin

Clindamycin

TMP/sulfamethoxazole

Cefazolin

Erythromycin

Cefaclor

Cefoxotin

Gatifloxacin

Imipenem

Levofloxacin

Linezolid

Meropenem

Ofloxacin

Penicillin

Rifampin

Sparfloxacin

Synercid

Cefotaxime

Telithromycin

Tetracycline

Trovafloxacin

Vancomycin

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Sorted by full name of antibiotic:

Amoxicillin

Ampicillin

Cefuroxime

Ceftriaxone

Chloramphenicol

Ciprofloxacin

Clarithromycin

Clindamycin

TMP/sulfamethoxazole

Cefazolin

Erythromycin

Cefaclor

Cefoxotin

Gatifloxacin

Imipenem

Levofloxacin

Linezolid

Meropenem

Ofloxacin

Penicillin

Rifampin

Sparfloxacin

Synercid

Cefotaxime

Telithromycin

Tetracycline

Trovafloxacin

Vancomycin

AMO

AMP

CFX

CFT

CHL

CIP

CLA

CLI

COT

CZL

ERY

FAC

FOX

GFX

IMI

LFX

LZO

MER

OFL

PEN

RIF

SPA

SYN

TAX

TEL

TET

TVA

VAN

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