What to know
This module provides an introduction to UShER, an easy to use web portal for fast phylogenetic tree calculation.
Overview
Presenter: Russ Corbett-Detig, PhD | Assistant Professor, Department of Biomolecular Engineering, University of California, Santa Cruz
Download Presentation Slides [PDF - 20 slides]
- Ultrafast Sample placement on Existing tRees (UShER) enables real-time phylogenetics for the SARS-CoV-2 pandemic. Turakhia et al. Nat Genet, 2021.
- UShER web portal. UCSC, updated 2021.
- UShER Wiki (documentation and tutorial). UCSC, updated 2021.
- UShER demo instructions, data