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Research
Genotyping, Orientalis-like
Yersinia pestis, and Plague Pandemics
Michel Drancourt,* Véronique Roux,* La Vu Dang,* Lam Tran-Hung,* Dominique
Castex,† Viviane Chenal-Francisque,‡ Hiroyuki Ogata,§ Pierre-Edouard Fournier,*
Eric Crubézy,¶ and Didier Raoult*
*Université de la Méditerranée, Marseille, France; †Université de Bordeaux,
Talence, France; ‡Institut Pasteur, Paris, France; §Information Génomique
et Structurale, Marseille, France; and ¶Université Paul Sabatier, Toulouse,
France
| Appendix 1. Accession
numbers |
|
|
AY312282
|
Yersinia pestis
|
Antiqua
|
Strain #343
|
Yp1 spacer
|
|
|
AY312283
|
Y. pestis
|
Antiqua
|
Strain Margaret
|
Yp1 spacer
|
|
AY312286
|
Y. pestis
|
Antiqua
|
Strain Japan
|
Yp1 spacer
|
|
AY312284
|
Y. pestis
|
Medievalis
|
Strain #PKR 292
|
Yp1 spacer
|
|
AY312285
|
Y. pestis
|
Medievalis
|
Strain #PAR 13
|
Yp1 spacer
|
|
AY343088
|
Y. pestis
|
Medievalis
|
Strain PKH-4
|
Yp1 spacer
|
|
AY312287
|
Y. pestis
|
Orientalis
|
Strain Hambourg 10
|
Yp1 spacer
|
|
AY312288
|
Y. pestis
|
Orientalis
|
Strain C092
|
Yp1 spacer
|
|
AY312289
|
Y. pestis
|
Orientalis
|
Strain 6/69
|
Yp1 spacer
|
|
AY312292
|
Y. pestis
|
Antiqua
|
Strain #343
|
Yp3 spacer
|
|
AY312293
|
Y. pestis
|
Antiqua
|
Strain Margaret
|
Yp3 spacer
|
|
AY312295
|
Y. pestis
|
Antiqua
|
Strain Japan
|
Yp3 spacer
|
|
AY312294
|
Y. pestis
|
Medievalis
|
Strain PKR 292
|
Yp3 spacer
|
|
AY312291
|
Y. pestis
|
Medievalis
|
Strain PKH-4
|
Yp3 spacer
|
|
AY312296
|
Y. pestis
|
Medievalis
|
Strain PAR 13
|
Yp3 spacer
|
|
AY312290
|
Y. pestis
|
Orientalis
|
Strain 6/69
|
Yp3 spacer
|
|
AY312297
|
Y. pestis
|
Orientalis
|
Strain Hambourg 10
|
Yp3 spacer
|
|
AY312298
|
Y. pestis
|
Orientalis
|
Strain C092
|
Yp3 spacer
|
|
AY312328
|
Y. pestis
|
Antiqua
|
Strain #343
|
Yp8 spacer
|
|
AY312330
|
Y. pestis
|
Antiqua
|
Strain Margaret
|
Yp8 spacer
|
|
AY312331
|
Y. pestis
|
Antiqua
|
Strain Japan
|
Yp8 spacer
|
|
AY312326
|
Y. pestis
|
Orientalis
|
Strain 6/69
|
Yp8 spacer
|
|
AY312333
|
Y. pestis
|
Orientalis
|
Strain Hambourg 10
|
Yp8 spacer
|
|
AY312334
|
Y. pestis
|
Orientalis
|
Strain C092
|
Yp8 spacer
|
|
AY312327
|
Y. pestis
|
Medievalis
|
Strain PKH-4
|
Yp8 spacer
|
|
AY312329
|
Y. pestis
|
Medievalis
|
Strain PKR 292
|
Yp8 spacer
|
|
AY312332
|
Y. pestis
|
Medievalis
|
Strain PAR 13
|
Yp8 spacer
|
|
AY312354
|
Y. pestis
|
Orientalis
|
ancient specimen #202
|
Yp3 spacer
|
|
AY312357
|
Y. pestis
|
Orientalis
|
ancient specimen #283
|
Yp3 spacer
|
|
AY312356
|
Y. pestis
|
Orientalis
|
ancient specimen #292
|
Yp3 spacer
|
|
|
